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 <front>
  <journal-meta>
   <journal-id journal-id-type="publisher-id">Russian Journal of Biological Physics and Chemisrty</journal-id>
   <journal-title-group>
    <journal-title xml:lang="en">Russian Journal of Biological Physics and Chemisrty</journal-title>
    <trans-title-group xml:lang="ru">
     <trans-title>АКТУАЛЬНЫЕ ВОПРОСЫ БИОЛОГИЧЕСКОЙ ФИЗИКИ И ХИМИИ</trans-title>
    </trans-title-group>
   </journal-title-group>
   <issn publication-format="print">2499-9962</issn>
  </journal-meta>
  <article-meta>
   <article-id pub-id-type="publisher-id">54167</article-id>
   <article-categories>
    <subj-group subj-group-type="toc-heading" xml:lang="ru">
     <subject>МОЛЕКУЛЯРНАЯ БИОФИЗИКА И ФИЗИКА БИОМОЛЕКУЛ</subject>
    </subj-group>
    <subj-group subj-group-type="toc-heading" xml:lang="en">
     <subject>MOLECULAR BIOPHYSICS AND PHYSICS OF BIOMOLECULES</subject>
    </subj-group>
    <subj-group>
     <subject>МОЛЕКУЛЯРНАЯ БИОФИЗИКА И ФИЗИКА БИОМОЛЕКУЛ</subject>
    </subj-group>
   </article-categories>
   <title-group>
    <article-title xml:lang="en">Studies of the amyloid formation process by the example of Aβ peptide fragments (Aβ16-25, Aβ31-40, Aβ33-42). New model of fibril formation</article-title>
    <trans-title-group xml:lang="ru">
     <trans-title>Изучение процесса амилоидообразования на примере фрагментов Аβ пептида (Аβ16-25, Аβ31-40, Аβ33-42). Новая модель формирования фибрилл</trans-title>
    </trans-title-group>
   </title-group>
   <contrib-group content-type="authors">
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Селиванова</surname>
       <given-names>О М</given-names>
      </name>
      <name xml:lang="en">
       <surname>Selivanova</surname>
       <given-names>O M</given-names>
      </name>
     </name-alternatives>
     <email>seliv@vega.protres.ru </email>
     <xref ref-type="aff" rid="aff-1"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Глякина</surname>
       <given-names>А В</given-names>
      </name>
      <name xml:lang="en">
       <surname>Glaykina</surname>
       <given-names>A V</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-2"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Горбунова</surname>
       <given-names>Е Ю</given-names>
      </name>
      <name xml:lang="en">
       <surname>Gorbunova</surname>
       <given-names>E Yu</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-3"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Мустаева</surname>
       <given-names>Л Г</given-names>
      </name>
      <name xml:lang="en">
       <surname>Mustaeva</surname>
       <given-names>L G</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-4"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Суворина</surname>
       <given-names>М Ю</given-names>
      </name>
      <name xml:lang="en">
       <surname>Suvorina</surname>
       <given-names>M Yu</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-5"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Григорашвили</surname>
       <given-names>Е И</given-names>
      </name>
      <name xml:lang="en">
       <surname>Grigorashvili</surname>
       <given-names>E I</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-6"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Никулин</surname>
       <given-names>А Д</given-names>
      </name>
      <name xml:lang="en">
       <surname>Nikulin</surname>
       <given-names>A D</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-7"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Сурин</surname>
       <given-names>А К</given-names>
      </name>
      <name xml:lang="en">
       <surname>Surin</surname>
       <given-names>A K</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-8"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Галзитская</surname>
       <given-names>О В</given-names>
      </name>
      <name xml:lang="en">
       <surname>Galzitskaya</surname>
       <given-names>O V</given-names>
      </name>
     </name-alternatives>
     <email>ogalzit@vega.protres.ru</email>
     <xref ref-type="aff" rid="aff-9"/>
    </contrib>
   </contrib-group>
   <aff-alternatives id="aff-1">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-2">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-3">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-4">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
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    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-6">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-7">
    <aff>
     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
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     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
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    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
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   </aff-alternatives>
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     <institution xml:lang="ru">Институт белка РАН; Филиал ФГБУН Институт биоорганической химии имени академиков М.М. Шемякина и Ю.А. Овчинникова РАН</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Institute of Protein Research, Russian Academy of Sciences; Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences </institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <pub-date publication-format="print" date-type="pub" iso-8601-date="2017-06-25T20:22:29+03:00">
    <day>25</day>
    <month>06</month>
    <year>2017</year>
   </pub-date>
   <pub-date publication-format="electronic" date-type="pub" iso-8601-date="2017-06-25T20:22:29+03:00">
    <day>25</day>
    <month>06</month>
    <year>2017</year>
   </pub-date>
   <volume>2</volume>
   <issue>1</issue>
   <fpage>259</fpage>
   <lpage>263</lpage>
   <history>
    <date date-type="received" iso-8601-date="2017-06-20T20:22:29+03:00">
     <day>20</day>
     <month>06</month>
     <year>2017</year>
    </date>
    <date date-type="accepted" iso-8601-date="2017-06-20T20:22:29+03:00">
     <day>20</day>
     <month>06</month>
     <year>2017</year>
    </date>
   </history>
   <self-uri xlink:href="https://rusjbpc.ru/en/nauka/article/54167/view">https://rusjbpc.ru/en/nauka/article/54167/view</self-uri>
   <abstract xml:lang="ru">
    <p>С помощью биоинформатических методов исследования в Аβ1-42 пептиде были определены амилоидогенные участки Аβ16-25, Аβ31-40 и Аβ33-42, отвечающие за формирование фибрилл. Фрагменты были синтезированы в достаточных количествах, а качество препаратов проверено с помощью масс-спектрометрического анализа. Для исследования их амилоидогенных свойств были применены методы флуоресцентной спектроскопии (связывание с ThT), электронной микроскопии, рентгеноструктурного анализа (РСА). Все три фрагмента в условиях 5% DMSO и 50 мМ Tris-HCl (pH 7,5) взаимодействуют с ThT. При этом фрагменты Аβ31-40, Аβ33-42 полимеризуются в виде фибрилл разной морфологии, а фрагмент Аβ16-25 формирует не свойственные для большинства амилоидов полимеры в виде пленок. Согласно данным рентгеноструктурного анализа фибриллы всех фрагментов показывают наличие двух основных рефлексов (4,6-4,8 Ǻ и 8-12 Ǻ), характерных для кросс-β структуры, что указывает на их амилоидную структуру. Анализ экспериментальных данных и структурное моделирование позволило заключить, что основным строительным блоком при формировании фибрилл фрагментами Аβ1-42 пептида является кольцевой олигомер. Взаимодействие кольцевых олигомеров различным образом приводит к формированию полимеров разной морфологии. На основании совокупности данных предложена новая модель фибриллобразования.</p>
   </abstract>
   <trans-abstract xml:lang="en">
    <p>Using bioinformatics methods of investigation, amyloidogenic regions of Aβ16-25, Aβ31-40, and Aβ33-42, responsible for the formation of fibrils, were determined in the Aβ1-42 peptide. Fragments were synthesized in sufficient quantities, and the quality of the preparations was verified by mass spectrometric analysis. To study their amyloidogenic properties, methods of fluorescence spectroscopy (ThT binding), electron microscopy, and X-ray diffraction analysis were used. All three fragments under conditions of 5% DMSO and 50 mM Tris-HCl (pH 7.5) interact with ThT. At the same time fragments of Aβ31-40 and Aβ33-42 polymerize in the form of fibrils of different morphology, and fragment Aβ16-25 form polymers that are not typical of most amyloids in the form of films. According to X-ray diffraction data, the fibrils of all fragments show the presence of two main reflexes (4.6-4.8 Ǻ and 8-12 Ǻ), characteristic of the cross-β structure, indicating their amyloid structure. Analysis of the experimental data and structural modeling allowed us to conclude that the main building block in the formation of fibrils by fragments of Aβ1-42 peptide is a ring oligomer. The interaction of ring oligomers in different ways leads to the formation of polymers of different morphologies. Based on the data set, a new model of fibrillation was proposed.</p>
   </trans-abstract>
   <kwd-group xml:lang="ru">
    <kwd>Аβ пептид</kwd>
    <kwd>амилоидогенные фрагменты Аβ1-42 пептида</kwd>
    <kwd>амилоиды</kwd>
    <kwd>биоинформатика</kwd>
    <kwd>новая модель амилоидообразования</kwd>
    <kwd>Ab peptide</kwd>
    <kwd>amyloidogenic fragments of А</kwd>
   </kwd-group>
   <kwd-group xml:lang="en">
    <kwd>β1-42 peptide</kwd>
    <kwd>amyloids</kwd>
    <kwd>bioinformatics</kwd>
    <kwd>new model of fibrillation</kwd>
   </kwd-group>
  </article-meta>
 </front>
 <body>
  <p></p>
 </body>
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