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 <front>
  <journal-meta>
   <journal-id journal-id-type="publisher-id">Russian Journal of Biological Physics and Chemisrty</journal-id>
   <journal-title-group>
    <journal-title xml:lang="en">Russian Journal of Biological Physics and Chemisrty</journal-title>
    <trans-title-group xml:lang="ru">
     <trans-title>АКТУАЛЬНЫЕ ВОПРОСЫ БИОЛОГИЧЕСКОЙ ФИЗИКИ И ХИМИИ</trans-title>
    </trans-title-group>
   </journal-title-group>
   <issn publication-format="print">2499-9962</issn>
  </journal-meta>
  <article-meta>
   <article-id pub-id-type="publisher-id">83366</article-id>
   <article-id pub-id-type="doi">10.29039/rusjbpc.2023.0623</article-id>
   <article-categories>
    <subj-group subj-group-type="toc-heading" xml:lang="ru">
     <subject>МОДЕЛИРОВАНИЕ В БИОФИЗИКЕ И БИОИНФОРМАТИКА</subject>
    </subj-group>
    <subj-group subj-group-type="toc-heading" xml:lang="en">
     <subject>MODELLING IN BIOPHYCIS AND BIOINFORMATISC</subject>
    </subj-group>
    <subj-group>
     <subject>МОДЕЛИРОВАНИЕ В БИОФИЗИКЕ И БИОИНФОРМАТИКА</subject>
    </subj-group>
   </article-categories>
   <title-group>
    <article-title xml:lang="en">SIMULATION OF THE ELECTRONIC ABSORPTION SPECTRA OF PHENOLS AND PRODUCTS OF THEIR ENZYMATIVE OXIDATION</article-title>
    <trans-title-group xml:lang="ru">
     <trans-title>МОДЕЛИРОВАНИЕ ЭЛЕКТРОННЫХ СПЕКТРОВ ПОГЛОЩЕНИЯ ФЕНОЛОВ И ПРОДУКТОВ ИХ ФЕРМЕНТАТИВНОГО ОКИСЛЕНИЯ</trans-title>
    </trans-title-group>
   </title-group>
   <contrib-group content-type="authors">
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Лаптева</surname>
       <given-names>Е. А.</given-names>
      </name>
      <name xml:lang="en">
       <surname>Lapteva</surname>
       <given-names>E. A.</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-1"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Кравченко</surname>
       <given-names>Е. М.</given-names>
      </name>
      <name xml:lang="en">
       <surname>Kravchenko</surname>
       <given-names>E. M.</given-names>
      </name>
     </name-alternatives>
     <email>elen.kravchenko@donnu.ru</email>
     <xref ref-type="aff" rid="aff-2"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Одарюк</surname>
       <given-names>И. Д.</given-names>
      </name>
      <name xml:lang="en">
       <surname>Odaryuk</surname>
       <given-names>I. D.</given-names>
      </name>
     </name-alternatives>
     <xref ref-type="aff" rid="aff-3"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Дорошкевич</surname>
       <given-names>В. С.</given-names>
      </name>
      <name xml:lang="en">
       <surname>Doroshkevich</surname>
       <given-names>V. S.</given-names>
      </name>
     </name-alternatives>
     <email>bio-chem@mail.ru</email>
     <xref ref-type="aff" rid="aff-4"/>
    </contrib>
    <contrib contrib-type="author">
     <name-alternatives>
      <name xml:lang="ru">
       <surname>Баранова</surname>
       <given-names>О. В.</given-names>
      </name>
      <name xml:lang="en">
       <surname>Baranova</surname>
       <given-names>O. V.</given-names>
      </name>
     </name-alternatives>
     <email>bio-chem@mail.ru</email>
     <xref ref-type="aff" rid="aff-5"/>
    </contrib>
   </contrib-group>
   <aff-alternatives id="aff-1">
    <aff>
     <institution xml:lang="ru">Донецкий национальный университет</institution>
     <city>Донецк</city>
     <country>Россия</country>
    </aff>
    <aff>
     <institution xml:lang="en">Donetsk National University</institution>
     <city>Donetsk</city>
     <country>Russian Federation</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-2">
    <aff>
     <institution xml:lang="ru">Донецкий национальный университет</institution>
     <city>Донецк</city>
     <country>Россия</country>
    </aff>
    <aff>
     <institution xml:lang="en">Donetsk National University</institution>
     <city>Donetsk</city>
     <country>Russian Federation</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-3">
    <aff>
     <institution xml:lang="ru">Донецкий национальный университет</institution>
     <city>Донецк</city>
     <country>Россия</country>
    </aff>
    <aff>
     <institution xml:lang="en">Donetsk National University</institution>
     <city>Donetsk</city>
     <country>Russian Federation</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-4">
    <aff>
     <institution xml:lang="ru">Донецкий национальный университет</institution>
     <city>Донецк</city>
     <country>Россия</country>
    </aff>
    <aff>
     <institution xml:lang="en">Donetsk National University</institution>
     <city>Donetsk</city>
     <country>Russian Federation</country>
    </aff>
   </aff-alternatives>
   <aff-alternatives id="aff-5">
    <aff>
     <institution xml:lang="ru">Донецкий национальный университет</institution>
     <country>ru</country>
    </aff>
    <aff>
     <institution xml:lang="en">Donetsk National University</institution>
     <country>ru</country>
    </aff>
   </aff-alternatives>
   <pub-date publication-format="print" date-type="pub" iso-8601-date="2024-05-27T09:21:53+03:00">
    <day>27</day>
    <month>05</month>
    <year>2024</year>
   </pub-date>
   <pub-date publication-format="electronic" date-type="pub" iso-8601-date="2024-05-27T09:21:53+03:00">
    <day>27</day>
    <month>05</month>
    <year>2024</year>
   </pub-date>
   <volume>8</volume>
   <issue>3</issue>
   <fpage>288</fpage>
   <lpage>292</lpage>
   <history>
    <date date-type="received" iso-8601-date="2023-07-20T00:00:00+03:00">
     <day>20</day>
     <month>07</month>
     <year>2023</year>
    </date>
   </history>
   <self-uri xlink:href="https://rusjbpc.ru/en/nauka/article/83366/view">https://rusjbpc.ru/en/nauka/article/83366/view</self-uri>
   <abstract xml:lang="ru">
    <p>Рассмотрена возможность получения спектров поглощения фенолов и продуктов их лакказного окисления методами квантово-химического моделирования. Первичную оптимизацию структур проводили полуэмпирическим методом PM3, а моделирование спектров - в рамках теории функционала плотности методом DFT/B3LYP/6-311G++dp в водной среде в программе Gamess US. Для большинства исследованных фенолов и соответствующих им хинонов расчетными методами получены спектры, содержащие одну полосу поглощения, для некоторых - большее число полос, в то время как в экспериментальных спектрах поглощения этих веществ в диапазоне работы спектрофотометра, как правило, с разной достоверностью видны две полосы. Для большинства веществ длины волн максимумов поглощения расчетных спектров отличаются от экспериментальных не более чем на 10 нм. Расчетные коэффициенты экстинкции, как правило, превышают экспериментальные в 1,5-2 раза. Для фенолов, которые не могут быть непосредственно окислены до хинонов, в качестве продуктов рассмотрены олигомерные продукты. Их расчетные спектры также достаточно хорошо соотносятся с экспериментальным спектром реакционной смеси. Спектральные характеристики, полученные моделированием в указанных условиях, можно использовать для примерной оценки состава реакционной смеси, но для их использования в точном количественном анализе и кинетических исследованиях необходимы дополнительные исследования.</p>
   </abstract>
   <trans-abstract xml:lang="en">
    <p>The possibility of obtaining absorption spectra of phenols and products of their laccase oxidation by quantum-chemical modeling methods is considered. The primary optimization of the structures was carried out by the semi-empirical PM3 method, and the spectra were simulated within the framework of the density functional theory by the DFT/B3LYP/6-311G++dp method in an aqueous medium using the Gamess US program. For most of the studied phenols and their corresponding quinones, spectra containing one absorption band were obtained by calculation methods, for some - a larger number of bands, while in the experimental absorption spectra of these substances in the operating range of the spectrophotometer, as a rule, two bands are visible with different reliability. For most substances, the wavelengths of the absorption maxima of the calculated spectra differ from the experimental ones by no more than 10 nm. The calculated extinction coefficients, as a rule, exceed the experimental ones by 1,5–2 times. For phenols that cannot be directly oxidized to quinones, oligomeric products are considered as products. Their calculated spectra also correlate quite well with the experimental spectrum of the reaction mixture. The spectral characteristics obtained by modeling under these conditions can be used for a rough estimate of the composition of the reaction mixture, but additional studies are needed for their use in accurate quantitative analysis and kinetic studies.</p>
   </trans-abstract>
   <kwd-group xml:lang="ru">
    <kwd>лакказа</kwd>
    <kwd>фенолы</kwd>
    <kwd>хиноны</kwd>
    <kwd>спектрофотометрия</kwd>
    <kwd>моделирование</kwd>
   </kwd-group>
   <kwd-group xml:lang="en">
    <kwd>laccase</kwd>
    <kwd>phenols</kwd>
    <kwd>quinones</kwd>
    <kwd>spectrophotometry</kwd>
    <kwd>simulation</kwd>
   </kwd-group>
  </article-meta>
 </front>
 <body>
  <p></p>
 </body>
 <back>
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</article>
